Browse of TCMCG054C00085 protein

CDS

Accession Number	TCMCG054C00085
gbkey	CDS
Protein Id	XP_008223229.1
Location	complement(join(588721..589319,589507..589878,590259..591342,591657..591952,592900..592978,593102..593189,595170..595317,595389..595650,596422..597765,598045..598311,599430..599673,600081..600140,600519..600839,600968..601046,601224..601303,601391..601468,602072..602152,602237..602324,602498..602584,602865..602992,603103..603176,604663..604686))
Gene	LOC103323013
GeneID	103323013
Organism	Prunus mume

Protein

Length	1960aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA246160
db_source	XM_008225007.2
Definition	PREDICTED: mediator of RNA polymerase II transcription subunit 13 [Prunus mume]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTTTTCAAAATCGGCGGTCTTCATCAAATATCATGGTTTCAGTTCCTCCCTCATGATTCTGAGTTGATCCCACAACCAGATAAAAGTGTGAAAGATGCTGCCACACAGCTGGTACTTTCATCGCATCTACAGTTGCAGAAGGAAGGATTTCTCAGCACATGGACCAACTCTTTTGTTGGGCCTTGGGATCCATCTCAAGGTTTGCACAATCCGGATGAGAAAATTAAACTCTGGCTTTTTCTTCCTGGCCGTCATTCAAGTTATGCTGACCCTGCTCAAGCTGCAGTCTCTAAATTAAGAGTTGTTGCTTCTGGACTTTGGATGTCTCCTGGGGACTCAGAAGAGGTTGCGACTGCCCTTTCTCAGGCTTTAAGGAATCGTATAGAAAGGGCGCTGTCTGGACTAGCCTACATGAGATTTGGAGATGTATTTTCAAAGTTCCATGCATCACAAAGTGAAGAGCTTCTCAGGAGAGGCCAGCCTACAGTTGAGTTTATCTTTGCTGCCACTGAAGAGGGAATCTTTGTGCATGCTTTAGTATCTGCGAAGCATATCCGAGCACTTTCCAGTGATGATTTGGAGAGAGTACAAAAGCATTCTTCCCAAAATTCGTGTTATGGGCTTCCAGTTATTGTTTCTCCTCATGGAATATGTGGGAGGCTAACTGGATGTTGTCCAGGTGATCTTGTCAAACAGGTGTATTTCAGTTCTAGCAAGCTTAAGACTTCAAATTTCATTGGTCTGCCAAACCATGTCTCTCAAGGTTCTGGTTCGCAACTGACGTGGCAAAATTGCTATGTTGAAGTTACCCTTGGCTGTCCTAGACCTAGAAGTGACTGGGCCTTACAATCAAACTCAAATTCCTTAAGGAATGTAGTGAAGCATCACCCTGTTGAATCTCCTTCTTTGGGAAGAGGTGATCAGAAGGGTTCATTGGATAATATATCAGTTTATGAAAAAACATTTGTATATCCGGCTGAGGCAGTGCTTGTCCCATCCTTGCAAGTGGCCGGATCATCTCTGAAAAGATTTTGGCTTCAAAATTGGATTGGACCCTCCATGCCTGGCTCATCATTCTTTATGCTTTGTTCTGACAGCATAGAACCAATGGAGGAATGCAACGAAACCAATGGGATACGCACACAACGTGGGTATAATAGTAGTAGCAACAGTAATAGTAGCAGCATTAGTAGCATAAGCAGCAGCTCCAGCGATAGTGATGACAAAATGGCTACAGGAGCCAGTGAACTAGAGGCAGATGCTGATTCTTTAACCTGTAGACAGTCTGGTTTATCTTTTAATAATCGGTTGGGAAATGATATCTCCAAATTGGGTTTTAAGCGTCCGCGAGATGGGATGGCAGAGTCATTTGCTGAAGTGGGAACAGCTACAAGTGCTTCTCTGCAGGATACATACAACTCTGATTTTGGTTCCATGGAAGTCAACAACTCAGCGATCACTGTAGTTACAAATGACCAGATTGGATCTCTTTGGGATTGGGATGGTGATGACAGATATGGCACTGATATCCATGCTTTGATTAATGAATTTGGAGATTTTGGTGACTTATTTGAAAGTGATGTTTTGCCTTTTGGAGAGCCCCCAGGAACTGCTGAATCTCAGGCTCTCATGTTTTCTGCACCAGATTTTGGCGATGTAGTTGACAACCCAGTTGGGGTGATGGATGTTTCTGATCAGTTGCTTTTGTCCGAGGGTTTTGCATCCTTTGAAAGCTTTATTCCTCCCCCTCCTGCAGCCATGGAAGAGACACTCATAAAAAATCAAGAAGGCATAAATAGTGCTTTGTCCTCGGGTCCAGTGAACTGCTCTTCAGCATCTAATATAAGTGAATTTGATCACATAATAAAAGCTGAGGCACTGATGACATTTGCTCCTGAATATGGAGCTGTTGAAACACCTACAAGTGAAGTCTCATCATCCATTTTCAGAAGCCCATACTTGCCCAAATCTAGACAAGCAGAGAGTTCAAATTCAAGCCCGAGCATTTACACATATGGTCCAACACCACCTTCTTCTTGCTTTGATGGATTTGATGAGAAGACTGGCATGCCGTCAAATTCTAAACCGTGTGCTGGAAAGAAAGATGCAAGCAACATTTTCCGGTCGAAGAACTATTACACTCATGTGGAGAGTGGAAAAGAGCAACAAGACAGAAGATTGCTTACAAGTAGTAATGGCATTGCGGTCGCACATGATGGGGTGGCACAATCTCCTTTCCCTGTTCTCAATTCTACAAATGCGGTCAAAGCGGCACAGAGGAAAATGACTGAAGGCACATTTGAATCAGAAAACTCCTTTCTATCTATGAGGACCATTCCTGCAACTGAAATTGAGTGCATCTTATTTCAGGCATCAATGTGTAGAATACGACACACCTTGTTGTCTTCAAGTAGTCTCTCATCTATTGGTTTTAGTAGGCTGCCAGGTGACCAAACTGTCATGCCAGAAAACATATCTGGAAAGTATGAGGCAAGGAGGAAAGAGTCGATACCCGTTAGAATTGCTGGTGATATTGATGGAGGAATGATAGATGGGCATCTCAATGCACCTGTTGGTGTCTGGCGCTCCGTAGGAGCTCCTAGAGTCCCAAAACCCTCAAGTTCATCTAGTATGGAAATTAGCTCGTCCTTGCCTCATACTTCATTCAATGATGAAAGTATGCTTTCTTATGGGAGACAACCACTTCAGGAACTTCTTGATGGTTTGTCATTACTTGTACAGCAAGCTACTTCCTTTGTTGATTTGTCCCTGGACTCAGATTGTAGTGATGGTCCTTATGGTTGGCTGGCGTTACAAGAGCAATGGAGGAAGGGATTTTCTTGTGGGCCGTCTATGGTCCATGCAGGTTGTGGGGGTACACTGGCTTCTTGTCATTCCCTGGACATTGCTGGTGTCGAGTTAGTTGATCCACTCTCTGCTGATGTGCATGCTTCATCTGTAATTAGTTTGCTGCAGTCTGACATAAAGACAGCCTTAAAATCTGCATTTGGTATTTTGGATGGGCCATTGCCTGTCACTGATTGGTGCCGAGGTCGCAACCAATCAGGTGAAAGCACGGTTGATGGATATTCTGCTGAGTCCACTATAAGTGAATGTAAAGATTCATCAAGTATTGTAGCTCCTTCTATTGTAGAACCATTGAGCCCATCACCATCTTGTTCTGCTGGATCAACTTGCCTTAAAGTTTCTAGTGCAATGGATGGAGCAAAAGTGGACGAGACATCCCAAAGAAGATCAAACCAAGAAAACTGTACTTCTGAGTCTGATCTGCAGATGTCCTCCCGGCTAAGACCAACACTTTTTGTTATTCCGTTGCCTGCTATACTCGTTGGGTATCAAGATGATTGGCTTAAGGCATCAGCAAGCTCTCTGCAACTTTGGGAAAAGGCTCCGCTTGAGCCATATGCTCTACAAAAACCTATTACTTATTATGTTGTATGTCCAGACATTGATCCCCTTACATCTGCTGCTGCCGATTTTTTCCAACAACTAGGAACTGTCTATGAAACATGCAAACTGGGAACTCATTTACCCCAGAGTTCTGGGAGCCAAATGGAGGTTGACTCTGGGAGAAGGCCATCGTCTGGGTTTGTCCTACTTGATTGTCCTCAAGCAATGAAGATAGAAAGTAGAAATGCATCTCTTGTGGGCTCACTAAGCGATTATTTTCTTTCTATTTCGAATGGTTGGGACTTGACAAGCTACCTTAAGTCTCTCTCAAAGGCTCTCAAAGCTTTGAAACTTGGTCACTGCTTGTCCACAAATGCAAAAGAAGGAAGTAGTGGTCCTTCTACGGTGATTTATGTAGTGTGCCCCTTCCCTGAGCCTATTGCAATTTTACAGACTGTCATTGAATCTTCTGTTGCTATTGGATCAGTCATTTTCCAATCAGACAGAGAAAGGAGATCTATATTGTACAGTCAGGTTTCGAAGGCATTAAGCTACTCGGCCACAGTGGACGAGGCATCAATATCAAATATTTTAGTACTCTCTGGGTTTGGTATTCCTAAATTGGTACTGCAGATTGTGACAGTGGATGCCATTTTTAAAGTTACAAGCCCGTCACTGAATGAACTTGTAATTCTCAAGGAGACTGCTTTTACTGTTTACAACAAGGCTCGCCGAATATCACGGGGAGCCTCTAGTGATGCAGTCCAATCATCGCTGTCTAGTAGATCCCATACAGTCCTCTCGCAAATGTCTTCTCCTACTCCAGGGACGTGGAAGGACTGTGGTGGCCCTCGAATTACTGGGCATTCCCTTCCAAGAGAGGGTGAGATGGATGCTAGTTTGAGGACTGGTAGCTGGGATAGTTCATGGCAAACAACAAGAACTGGAGCAGCAAACTGCGATCCCAACAGAATTGGAGATATTTTTTCTCAAGATGAGACTCGCTACATGTTTGAACCACTTTTTATTCTTGCAGAACCCGGTTCTCTGGAGCGTGCGTTTTCACCTTTAGCTTTTGGTAATTTATCATCAGAACCTTCAAAGGCATTGTCCGATGACATCAGTGGAGGCTTTATGCAGAGTACAAGTTTAGGTGGAAGTGCGGATTCTGGATCAGGCTCTCAAGCTGATGGATCAGAGCTAGATAAGATCCCTCCTAGCCTACATTGTTGCTACGGATGGACAGAGGATTGGCGTTGGCTAATATGCATCTGGACAGATTCAAGGGGGGAGTTACTTGATAGCCACATATTCCCTTTTGGTGGAATTAGCAGTAGACAGGACACAAAGGGACTGGAATGTCTTTTTGTACAAGTTCTGCAGCAAGGCTGTCAAATACTGCAGGCTTGCTCTTTGGATACCGGTGTTGCCAAGCCGAGGGATTTTGTGATTGCACGCATTGGAAGTTTCTACGAACTTGAATACCAAGAGTGGCAGAAAGCAATTAATTCAGTTGGGGGTTCAGAAGTGAAAAAATGGCACTTGCAACTGCGGCGATCTGTGTCTGATGGAGTGTCTGCTAGTAGTAACGGGCCTTCCTTGCAGCAGCAGGAGATGAGTTTGATTCAAGAAAGAACCCTACCTTCTTCACCTGGTCCTCTGTATGGCAGCTCTCACTCAAAAATATCTGGATTTATGAAAGGTGGTTTAGGACAACCTTCTGTGAGAAAGCAGCTTATGGGCACACAGTTGATTGACAGCTCAAGGAGTTTGCTTCAGTGGGTGCAAAGTATCAGCTTCATTACAATTGCAATTGATCATTCTTTACATCTTGTTTTTCCAGCAGATACGCAATCACCAGGAGCTCATGGTGGTGTTGGTGTGGGCTCATCAGGGTATCTGGAAGGCACACCTGTGAAGTCTCTTGGTTCCACACCTGCTGCTTACATTCTGATCCCATCACCCAGCATGCGTTTCCTCCCTCCAACACCACTTCAGCTGCCCACATGCCTCACTGCTGAATCACCTCCACTAGCCCATCTCCTTCACAGTAAAGGCTCTGCTATTCCCCTTTCTACTTGTTTTGTGGTCTCAAAAGCTGTACCTACTATGAGGAGAGATTATAGGAGCAACTTGAAAGAAGAATGGCCTTCAACTCTTTTGGTCAGTCTTATTGATCATTATGGAGGTAATAACTTTAGCCAAGAAAAACTCATGAGAGGTAATACCAAACAAGTGGGAAGGAGTCCAAGCTCGGAAGCTAGAGATTTGGAAATTGAGACGCATGTAATTCTCGAATCCCTGGCAGCAGAGCTTCATGCACTCTCTTGGATGACTGTAAGTCCAGCATACCTGGAGAGGCGAACTGCACTGCCTTTTCACTGTGACATGGTTTTGAGATTAAGAAGGCTTTTGCATTTTGCTGATAAGGACCTCTCCAGGCATCAAGAGAAGCCATAG

Protein:   MWTNVFKIGGLHQISWFQFLPHDSELIPQPDKSVKDAATQLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSYADPAQAAVSKLRVVASGLWMSPGDSEEVATALSQALRNRIERALSGLAYMRFGDVFSKFHASQSEELLRRGQPTVEFIFAATEEGIFVHALVSAKHIRALSSDDLERVQKHSSQNSCYGLPVIVSPHGICGRLTGCCPGDLVKQVYFSSSKLKTSNFIGLPNHVSQGSGSQLTWQNCYVEVTLGCPRPRSDWALQSNSNSLRNVVKHHPVESPSLGRGDQKGSLDNISVYEKTFVYPAEAVLVPSLQVAGSSLKRFWLQNWIGPSMPGSSFFMLCSDSIEPMEECNETNGIRTQRGYNSSSNSNSSSISSISSSSSDSDDKMATGASELEADADSLTCRQSGLSFNNRLGNDISKLGFKRPRDGMAESFAEVGTATSASLQDTYNSDFGSMEVNNSAITVVTNDQIGSLWDWDGDDRYGTDIHALINEFGDFGDLFESDVLPFGEPPGTAESQALMFSAPDFGDVVDNPVGVMDVSDQLLLSEGFASFESFIPPPPAAMEETLIKNQEGINSALSSGPVNCSSASNISEFDHIIKAEALMTFAPEYGAVETPTSEVSSSIFRSPYLPKSRQAESSNSSPSIYTYGPTPPSSCFDGFDEKTGMPSNSKPCAGKKDASNIFRSKNYYTHVESGKEQQDRRLLTSSNGIAVAHDGVAQSPFPVLNSTNAVKAAQRKMTEGTFESENSFLSMRTIPATEIECILFQASMCRIRHTLLSSSSLSSIGFSRLPGDQTVMPENISGKYEARRKESIPVRIAGDIDGGMIDGHLNAPVGVWRSVGAPRVPKPSSSSSMEISSSLPHTSFNDESMLSYGRQPLQELLDGLSLLVQQATSFVDLSLDSDCSDGPYGWLALQEQWRKGFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADVHASSVISLLQSDIKTALKSAFGILDGPLPVTDWCRGRNQSGESTVDGYSAESTISECKDSSSIVAPSIVEPLSPSPSCSAGSTCLKVSSAMDGAKVDETSQRRSNQENCTSESDLQMSSRLRPTLFVIPLPAILVGYQDDWLKASASSLQLWEKAPLEPYALQKPITYYVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHLPQSSGSQMEVDSGRRPSSGFVLLDCPQAMKIESRNASLVGSLSDYFLSISNGWDLTSYLKSLSKALKALKLGHCLSTNAKEGSSGPSTVIYVVCPFPEPIAILQTVIESSVAIGSVIFQSDRERRSILYSQVSKALSYSATVDEASISNILVLSGFGIPKLVLQIVTVDAIFKVTSPSLNELVILKETAFTVYNKARRISRGASSDAVQSSLSSRSHTVLSQMSSPTPGTWKDCGGPRITGHSLPREGEMDASLRTGSWDSSWQTTRTGAANCDPNRIGDIFSQDETRYMFEPLFILAEPGSLERAFSPLAFGNLSSEPSKALSDDISGGFMQSTSLGGSADSGSGSQADGSELDKIPPSLHCCYGWTEDWRWLICIWTDSRGELLDSHIFPFGGISSRQDTKGLECLFVQVLQQGCQILQACSLDTGVAKPRDFVIARIGSFYELEYQEWQKAINSVGGSEVKKWHLQLRRSVSDGVSASSNGPSLQQQEMSLIQERTLPSSPGPLYGSSHSKISGFMKGGLGQPSVRKQLMGTQLIDSSRSLLQWVQSISFITIAIDHSLHLVFPADTQSPGAHGGVGVGSSGYLEGTPVKSLGSTPAAYILIPSPSMRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTCFVVSKAVPTMRRDYRSNLKEEWPSTLLVSLIDHYGGNNFSQEKLMRGNTKQVGRSPSSEARDLEIETHVILESLAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKDLSRHQEKP